Class: Taxon

An organism or taxonomic group, identified by an NCBI Taxonomy or GTDB identifier.

URI: [micokg:Taxon](https://w3id.org/micokg/Taxon)

 classDiagram
    class Taxon
    click Taxon href "../Taxon/"
      NamedThing <|-- Taxon
        click NamedThing href "../NamedThing/"

      Taxon : description

      Taxon : id

      Taxon : name

      Taxon : taxon_rank

## Inheritance * [NamedThing](NamedThing.md) * **Taxon** ## Class Properties | Property | Value | | --- | --- | | Class URI | [micokg:Taxon](https://w3id.org/micokg/Taxon) | ## Slots | Name | Cardinality and Range | Description | Inheritance | | --- | --- | --- | --- | | [taxon_rank](taxon_rank.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Taxonomic rank (TAXRANK term), e | direct | | [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | CURIE or IRI | [NamedThing](NamedThing.md) | | [name](name.md) | 0..1
[String](String.md) | Human-readable label | [NamedThing](NamedThing.md) | | [description](description.md) | 0..1
[String](String.md) | Free-text description | [NamedThing](NamedThing.md) | ## Usages | used by | used in | type | used | | --- | --- | --- | --- | | [Container](Container.md) | [taxa](taxa.md) | range | [Taxon](Taxon.md) | ## Identifier and Mapping Information ### Valid ID Prefixes Instances of this class *should* have identifiers with one of the following prefixes: * NCBITaxon * GTDB ### Schema Source * from schema: https://w3id.org/micokg ## Mappings | Mapping Type | Mapped Value | | --- | --- | | self | micokg:Taxon | | native | micokg:Taxon | | exact | biolink:OrganismTaxon, dwc:Taxon | ## LinkML Source ### Direct

name: Taxon
id_prefixes:
- NCBITaxon
- GTDB
description: An organism or taxonomic group, identified by an NCBI Taxonomy or GTDB
  identifier.
from_schema: https://w3id.org/micokg
exact_mappings:
- biolink:OrganismTaxon
- dwc:Taxon
is_a: NamedThing
slots:
- taxon_rank
class_uri: micokg:Taxon

### Induced

name: Taxon
id_prefixes:
- NCBITaxon
- GTDB
description: An organism or taxonomic group, identified by an NCBI Taxonomy or GTDB
  identifier.
from_schema: https://w3id.org/micokg
exact_mappings:
- biolink:OrganismTaxon
- dwc:Taxon
is_a: NamedThing
attributes:
  taxon_rank:
    name: taxon_rank
    description: Taxonomic rank (TAXRANK term), e.g. TAXRANK:0000006 species.
    from_schema: https://w3id.org/micokg
    rank: 1000
    slot_uri: micokg:taxon_rank
    owner: Taxon
    domain_of:
    - Taxon
    range: uriorcurie
    pattern: ^TAXRANK:\d{7}$
  id:
    name: id
    description: CURIE or IRI. Reuse ontology IDs; mint micokg:<type>/<local-id> for
      instances.
    from_schema: https://w3id.org/micokg
    rank: 1000
    identifier: true
    owner: Taxon
    domain_of:
    - NamedThing
    range: uriorcurie
    required: true
  name:
    name: name
    description: Human-readable label.
    from_schema: https://w3id.org/micokg
    rank: 1000
    slot_uri: rdfs:label
    owner: Taxon
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    description: Free-text description.
    from_schema: https://w3id.org/micokg
    rank: 1000
    slot_uri: dct:description
    owner: Taxon
    domain_of:
    - NamedThing
    range: string
class_uri: micokg:Taxon